How Can We Help You?

• I need microbiome analysis
• I need to test my product in research conditions
• I need sample collection

What We Offer

• Aquaculture: Experience with aqua and fish samples, with developing methods.
• Companion Animals: Faecal sample analysis for health indicators (client- or university-collected samples only).

Our Services for Aqua

Comprehensive shotgun metagenomic sequencing for fish and shrimp intestinal microbiota

Unlock the aquatic microbiomes with our advanced shotgun sequencing services. We provide in-depth insights into the intestinal microbiota of fish and shrimp, enabling you to understand microbial diversity and its implications for health and growth.

Targeted real-time PCR and microbial metabolite analysis for Atlantic salmon digesta samples

Optimize your Atlantic salmon production with our specialized targeted real-time PCR and metabolite analysis services. We thoroughly assess both commensal and pathogenic bacteria along with the SCFA profile in Atlantic salmon intestinal samples, equipping you with crucial data to enhance farm management and improve fish health.

Ex vivo intestinal fermentation model of Atlantic salmon 

Investigate the impact of various feed compositions and ingredients on the intestinal fermentation of Atlantic salmon with our innovative ex vivo model simulation model. Our research enables you to evaluate the structure and metabolic responses of salmon intestinal microbiota, guiding informed dietary choices for improved aquaculture practices.

Our Services for Companion Animals

At Alimetrics, we understand the importance of the health and well-being of companion animals. That’s why we offer tailored analyses and solutions based on pet samples to address various health concerns.

Sample Analyses

We specialize in analyzing faces and urine samples from companion animals, focusing on:

• Microbial analyses to investigate gut and urinary microbiota composition.
• Quantitative PCR (qPCR) for precise detection and quantification of specific bacterial species or families.
• 16S rRNA gene sequencing to profile microbial communities at the genus or species level, providing insights into microbial diversity and dysbiosis.
• Additional specialized analyses:
  • Measurement of bacterial metabolites in faecal samples to evaluate gut metabolic activity.
  • Detection of ammonia concentrations as a marker of protein fermentation.
  • Assessment of immunological markers to study inflammation and immune responses.
  • Screening for toxins associated with microbial metabolism or environmental exposure.

Tailored Research Projects for Dogs

We collaborate with clients on customized research projects to address specific health challenges in dogs, applying scientific rigor to deliver reliable data.

1. Studies on Canine Diarrhea
   • Pathogen screening in faecal samples using molecular techniques:
     • Analysis on the day of diarrhea onset to identify causative agents.
     • Follow-up analysis 7 days post-diarrhea to monitor recovery or persistence of pathogens.
   • Probiotic efficacy studies:
     • Evaluation of probiotic strains after oral administration.
     • Long-term monitoring of probiotic colonization and persistence in the gut, with analyses conducted up to 27 days post-administration.
2. Investigations into Canine Urethritis
   • qPCR diagnostics to detect bacterial pathogens in urine samples with high sensitivity.
   • 16S rRNA gene sequencing for a detailed characterization of urinary microbiota, enabling the identification of potential dysbiosis or pathogenic shifts.